Institute for Biology, Engineering and Medicine (I-BEAM)

Recent Publications by Our Faculty, Postdocs, and Students

Visual from one of the papers
Figure 1 from Black C, Darie R, Borton D. Organic Electronics for Artificial Touch. Trends Neurosci. 2018 Sep;41(9):568-570.
Biological and Artificial Implementation of Sensory Processes. In an intact hand (A), the deformation of skin on the piano keys activates mechanoreceptors (i.e., Merkel discs) that relay information via slowly adapting (SA) or rapidly adapting (RA) sensory afferents through synaptic connections to spinal circuits. In turn, this activates spinal motor reflexes and downstream thalamocortical circuits (B) that enable fine adjustments of the fingers while playing. Similarly, a prosthetic hand fitted with artificial sensory afferents (ASAs) (C) could read-in pressure sensor deformations as voltage pulses that are integrated by multiple synaptic transistors to evoke tonic spiking in remaining nerves through cuff electrodes. The activated afferents would then provide input to the spinal cord to drive more naturalistic perception downstream as well as to activate spinal motor neurons, which could be interfaced with the prosthetic to provide reflexive feedback.

Black C, Darie R, Borton DOrganic Electronics for Artificial Touch. Trends Neurosci. 2018 Sep;41(9):568-570.

Brandman DM, Burkhart MC, Kelemen J, Franco B, Harrison MT, Hochberg LRRobust Closed-Loop Control of a Cursor in a Person with Tetraplegia using Gaussian Process Regression. Neural Comput. 2018 Sep 14:1-23.

Eom K, Byun KM, Jun SB, Kim SJ, Lee JTheoretical Study on Gold-Nanorod-Enhanced Near-Infrared Neural Stimulation. Biophys J. 2018 Sep 13. pii: S0006-3495(18)31028-2. doi: 10.1016/j.bpj.2018.09.004.

Estrellas KM, Fiecas M, Azagury A, Laulicht B, Cho DY, Mancini A, Reineke J, Furtado S, Mathiowitz ETime-dependent mucoadhesion of conjugated bioadhesive polymers. Colloids Surf B Biointerfaces. 2018 Oct 5;173:454-469.

Even-Chen N, Stavisky SD, Pandarinath C, Nuyujukian P, Blabe CH, Hochberg LR, Henderson JM, Shenoy KV. Feasibility of Automatic Error Detect-and-Undo System in Human Intracortical Brain-Computer Interfaces. IEEE Trans Biomed Eng. 2018 Aug;65(8):1771-1784.

Ghosh D, Dawson MRMicroenvironment Influences Cancer Cell Mechanics from Tumor Growth to Metastasis. Adv Exp Med Biol. 2018;1092:69-90.

Godfrin MPSihlabela M, Bose A, Tripathi ABehavior of Marine Bacteria in Clean Environment and Oil Spill Conditions. Langmuir. 2018 Jul 31;34(30):9047-9053.

Manning KL, Thomson AH, Morgan JRFunnel-Guided Positioning of Multi-cellular Microtissues to Build Macrotissues. Tissue Eng Part C Methods. 2018 Aug 14.

Pandarinath C, O'Shea DJ, Collins J, Jozefowicz R, Stavisky SD, Kao JC, Trautmann EM, Kaufman MT, Ryu SI, Hochberg LR, Henderson JM, Shenoy KV, Abbott LF, Sussillo D. Inferring single-trial neural population dynamics using sequential auto-encoders.  Nat Methods. 2018 Sep 17.

Pidgeon TS, DaSilva KA, Crisco JJ, Johnson EC, Chambers AB, DaSilva MF. Three-Dimensional Characterization of Trabecular Bone Mineral Density of the Distal Radius Utilizing Quantitative Computed Tomography. Hand (N Y). 2018 Jul 1:1558944718789407.

Qadri M, Jay GD, Zhang LX, Wong W, Reginato AM, Sun C, Schmidt TA, Elsaid KA. Recombinant human proteoglycan-4 reduces phagocytosis of urate crystals and downstream nuclear factor kappa B and inflammasome activation and production of cytokines and chemokines in human and murine macrophages. Arthritis Res Ther. 2018 Aug 29;20(1):192.

Qadri M, Almadani S, Jay GD, Elsaid KA. Role of CD44 in Regulating TLR2 Activation of Human Macrophages and Downstream Expression of Proinflammatory Cytokines. J Immunol. 2018 Jan 15;200(2):758-767.

Shukla SShukla ATunable Antibiotic Delivery from Gellan Hydrogels. Journal of Materials Chemistry B, DOI: 10.1039/C8TB00980E.

Snider A, Nilsson M, Dupal M, Toloue M, Tripathi AA Microfluidics Workflow for Sample Preparation for Next-Generation DNA Sequencing. SLAS Technol. 2018 Aug 24:2472630318796133.

Stefan SJeong KS, Polucha C, Tapinos N, Toms SA, Lee JDetermination of confocal profile and curved focal plane for OCT mapping of the attenuation coefficient. Biomed Opt Express. 2018 Oct 1;9(10):5084-5099.

Wang H, Sui N, Bai X, Zhang Y, Rice Q, Seo FJ, Zhang Q, Colvin VL, Yu WW. Emission Recovery and Stability Enhancement of Inorganic Perovskite Quantum Dots. J Phys Chem Lett. 2018 Aug 2;9(15):4166-4173.

Wilks BT, Evans EB, Nakhla MN, Morgan JRDirecting fibroblast self-assembly to fabricate highly-aligned, collagen-rich matrices. Acta Biomater. 2018 Sep 26. pii: S1742-7061(18)30550-6.