
Clinical Neurophysiology
Hochberg Lab
Leigh Hochberg’s lab for Restorative Neurobiology has recently published two papers on their recent work on brain-computer interfaces (BCIs). Hochberg’s lab investigates human intracortical neurophysiology and the planning and reduction of voluntary movement with the goal of developing BCIs for people with paralysis or limb loss. They are also involved with BrainGate, an interdisciplinary initiative to create devices that restore communication and movement to patients with neurologic diseases, brain injury, or limb loss. Professor Hochberg earned his bachelor’s degree in neuroscience from Brown in 1990 and his MD and PhD degrees from Emory University. The first paper, “Stable long-term BCI enabled communication in ALS and locked-in syndrome using LFP signals”, was published in the Journal of Neurophysiology in April. The paper focuses on applying BCI technology, which usually requires frequent technical intervention and calibration, to long-term everyday use. The BCI used in this study translated intracortical local field potentials (LFPs) into typing. The two patients in the study retained the BCI for 76 and 138 days and were able to type 3.07 and 6.88 correct characters per minute with the system. The second paper, entitled “Feasibility of an EEG-based brain-computer interface in the intensive care unit”, was published in Clinical Neurophysiology. The paper used a commercially available EEG-based BCI to confirm consciousness in patients in the ICU. The device specifically tested ten patients with locked-in syndrome and acute disorders of consciousness. Using auditory and visual evoked potentials as well as motor imagery, the BCI assessed consciousness in less than one hour. While the BCI confirmed the locked-in patient’s consciousness, there was overall no association between BCI responses and behavioral signs of consciousness.
- Milekovic T, Sarma AA, Bacher D, Simeral JD, Saab J, Pandarinath C, Sorice BL, Blabe C, Oakley EM, Tringale KR, Eskandar E, Cash SS, Henderson JM, Shenoy KV, Donoghue JP, Hochberg LR. Stable long-term BCI-enabled communication in ALS and locked-in syndrome using LFP signals. J Neurophysiol. 2018.
- Chatelle C, Spencer CA, Cash SS, Hochberg LR, Edlow BL. Feasibility of an EEG-based brain-computer interface in the intensive care unit. Clin Neurophysiol. 2018;129(8):1519-1525.
Wong & Franck Labs
Professors Ian Wong and Christian Franck also recently coauthored a paper on rapid particle tracking in Scientific Reports. The paper describes an algorithm that tracks tracer particles or labeled objects of interests, such as viruses and bacteria, to reveal complex collective behaviors. While there exist algorithms that can track particles over time, these algorithms can be slow and have difficulty distinguishing identical or overlapping particles. Topology-based Particle Tracking, as the authors have named it, uses vectors to describe the positions of an object’s nearest neighbor, removes outliers, and finds the volumes between the particles and how these volumes deform over time. The authors hope that this algorithm will be useful for examining complex motion in 2D and 3D images.
- Patel M, Leggett SE, Landauer AK, Wong IY, Franck C. Rapid, topology-based particle tracking for high-resolution measurements of large complex 3D motion fields. Scientific reports. 2018; 8(1):5581.
CBME Labs
In addition to the papers discussed above, CBME faculty have also published these papers over the course of the spring semester:
- Azagury A, Fonseca VC, Cho DY, Perez-Rogers J, Baker CM, Steranka E, Goldenshtein V, Calvao D, Darling EM, Mathiowitz E. Single Step Double-walled Nanoencapsulation (SSDN). J Control Release. 2018;280:11-19.
- Bellamkonda S, Woodward SJ, Campolettano E, Gellner R, Kelley ME, Jones DA, Genemaras A, Beckwith JG, Greenwald RM, Maerlender AC, Rowson S Jr., Duma SM, Urban JE, Stitzel JD, Crisco JJ. Head Impact Exposure in Practices Correlates with Exposure in Games for Youth Football Players. J Appl Biomech. 2018:1-22.
- Birbaumer N, Hochberg LR. A useful communication in brain-computer interfaces. Neurology. 2018.
- Crisco JJ, Osvalds NJ, Rainbow MJ. The Kinetics of Swinging a Baseball Bat. J Appl Biomech. 2018:1-22.
- Cui FR, Ip BC, Morgan JR, Tripathi A. Hydrodynamics of the Bio-Gripper: A Fluid-Driven "Claw Machine" for Soft Microtissue Translocation. SLAS Technol. 2018 Jun 1:2472630318775079.
- Dempsey ME, Marble HD, Shen TL, Fawzi NL, Darling EM. Synthesis and Characterization of a Magnetically Active 19F Molecular Beacon. Bioconjugate chemistry. 2018; 29(2):335-342.
- Evans EB, Brady SW, Tripathi A, Hoffman-Kim D. Schwann cell durotaxis can be guided by physiologically relevant stiffness gradients. Biomater Res. 2018;22:14.
- González-Cruz RD, Sadick JS, Fonseca VC, Darling EM. Nuclear Lamin Protein C Is Linked to Lineage-Specific, Whole-Cell Mechanical Properties. Cellular and molecular bioengineering. 2018; 11(2):131-142.
- Kaiser NJ, Munarin F, Coulombe KLK. Custom Engineered Tissue Culture Molds from Laser-etched Masters. J Vis Exp. 2018;(135).
- Kim TY, Kofron CM, King ME, Markes AR, Okundaye AO, Qu Z, Mende U, Choi B-R. Directed fusion of cardiac spheroids into larger heterocellular microtissues enables investigation of cardiac action potential propagation via cardiac fibroblasts. PLoS One. 2018 ;13(5):e0196714.
- Labriola NR, Sadick JS, Morgan JR, Mathiowitz E, Darling EM. Cell Mimicking Microparticles Influence the Organization, Growth, and Mechanophenotype of Stem Cell Spheroids. Annals of biomedical engineering. 2018:1-14.
- Leary E, Rhee C, Wilks BT, Morgan JR. Quantitative Live-Cell Confocal Imaging of 3D Spheroids in a High-Throughput Format. SLAS Technol. 2018:2472630318756058.
- Parsons AM, Ciombor DM, Liu PY, Darling EM. Regenerative Potential and Inflammation-Induced Secretion Profile of Human Adipose-Derived Stromal Vascular Cells Are Influenced by Donor Variability and Prior Breast Cancer Diagnosis. Stem cell reviews. 2018: 1-2.
- Qadri MM, Jay GD, Ostrom RS, Zhang LX, Elsaid KA. cAMP Attenuates TGF-β's Profibrotic Responses in Osteoarthritic Synoviocytes: Involvement of Hyaluronan and PRG4. Am J Physiol Cell Physiol. 2018.
- Tang J, Erdener SE, Li B, Fu B, Sakadzic S, Carp SA, Lee J, Boas DA. Shear-induced diffusion of red blood cells measured with dynamic light scattering-optical coherence tomography. Journal of Biophotonics. 2018; 11(2):e201700070.
- Ware JK, Owens BD, Akelman MR, Karamchedu NP, Fadale PD, Hulstyn MJ, Shalvoy RM, Badger GJ, Fleming BC. Preoperative KOOS and SF-36 Scores Are Associated With the Development of Symptomatic Knee Osteoarthritis at 7 Years After Anterior Cruciate Ligament Reconstruction. Am J Sports Med. 2018:363546517751661.
- Wei Z, Reisdorf RL, Thoreson AR, Jay GD, Moran SL, An KN, Amadio PC, Zhao C. Comparison of Autograft and Allograft with Surface Modification for Flexor Tendon Reconstruction: A Canine in Vivo Model. J Bone Joint Surg Am. 2018;100(7):e42.